Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKY_1104 | KKY_1545 | KKY_1104 | KKY_1545 | Signal peptidase I; Belongs to the peptidase S26 family. | Multimodular transpeptidase-transglycosylase. | 0.639 |
KKY_1104 | KKY_2823 | KKY_1104 | KKY_2823 | Signal peptidase I; Belongs to the peptidase S26 family. | Putative metalloendopeptidase-related membrane protein metalloendopeptidases. | 0.451 |
KKY_1104 | KKY_3413 | KKY_1104 | KKY_3413 | Signal peptidase I; Belongs to the peptidase S26 family. | Multimodular transpeptidase-transglycosylase. | 0.498 |
KKY_1104 | secY | KKY_1104 | KKY_1651 | Signal peptidase I; Belongs to the peptidase S26 family. | Preprotein translocase secY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.556 |
KKY_1545 | KKY_1104 | KKY_1545 | KKY_1104 | Multimodular transpeptidase-transglycosylase. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.639 |
KKY_1545 | KKY_1547 | KKY_1545 | KKY_1547 | Multimodular transpeptidase-transglycosylase. | N-acetylmuramoyl-L-alanine amidase. | 0.736 |
KKY_1545 | KKY_2823 | KKY_1545 | KKY_2823 | Multimodular transpeptidase-transglycosylase. | Putative metalloendopeptidase-related membrane protein metalloendopeptidases. | 0.707 |
KKY_1545 | KKY_3170 | KKY_1545 | KKY_3170 | Multimodular transpeptidase-transglycosylase. | Peptidase M23B. | 0.421 |
KKY_1545 | KKY_3413 | KKY_1545 | KKY_3413 | Multimodular transpeptidase-transglycosylase. | Multimodular transpeptidase-transglycosylase. | 0.943 |
KKY_1545 | KKY_638 | KKY_1545 | KKY_638 | Multimodular transpeptidase-transglycosylase. | Multimodular transpeptidase-transglycosylase. | 0.944 |
KKY_1545 | mltG | KKY_1545 | KKY_1017 | Multimodular transpeptidase-transglycosylase. | Protein YceG like protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.675 |
KKY_1545 | mtgA | KKY_1545 | KKY_3047 | Multimodular transpeptidase-transglycosylase. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.461 |
KKY_1547 | KKY_1545 | KKY_1547 | KKY_1545 | N-acetylmuramoyl-L-alanine amidase. | Multimodular transpeptidase-transglycosylase. | 0.736 |
KKY_1547 | KKY_2823 | KKY_1547 | KKY_2823 | N-acetylmuramoyl-L-alanine amidase. | Putative metalloendopeptidase-related membrane protein metalloendopeptidases. | 0.464 |
KKY_1547 | KKY_3170 | KKY_1547 | KKY_3170 | N-acetylmuramoyl-L-alanine amidase. | Peptidase M23B. | 0.720 |
KKY_1547 | KKY_3413 | KKY_1547 | KKY_3413 | N-acetylmuramoyl-L-alanine amidase. | Multimodular transpeptidase-transglycosylase. | 0.443 |
KKY_1547 | mltG | KKY_1547 | KKY_1017 | N-acetylmuramoyl-L-alanine amidase. | Protein YceG like protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.525 |
KKY_2823 | KKY_1104 | KKY_2823 | KKY_1104 | Putative metalloendopeptidase-related membrane protein metalloendopeptidases. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.451 |
KKY_2823 | KKY_1545 | KKY_2823 | KKY_1545 | Putative metalloendopeptidase-related membrane protein metalloendopeptidases. | Multimodular transpeptidase-transglycosylase. | 0.707 |
KKY_2823 | KKY_1547 | KKY_2823 | KKY_1547 | Putative metalloendopeptidase-related membrane protein metalloendopeptidases. | N-acetylmuramoyl-L-alanine amidase. | 0.464 |
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